Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108424536Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (365 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
   
  
 0.845
mrpl40
Mitochondrial ribosomal protein L40.
      
 0.722
ugdh
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.687
apmap
Adipocyte plasma membrane associated protein.
     
  0.652
immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.624
d2hgdh
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.619
pgk1
Phosphoglycerate kinase.
      
 0.607
zdhhc24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.601
tango2
Transport and golgi organization 2 homolog (Drosophila).
      
 0.568
dgcr2
DiGeorge syndrome critical region gene 2.
      
 0.566
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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