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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108413146SUN domain-containing protein. (1317 aa)    
Predicted Functional Partners:
LOC108434341
Transmembrane anterior posterior transformation 1b.
    
   0.636
LOC108424200
Transmembrane anterior posterior transformation 1a.
    
   0.636
rd3
Retinal degeneration 3, GUCY2D regulator.
      
 0.550
ttll2
Tubulin tyrosine ligase-like family, member 2.
      
 0.516
sun1
SUN domain-containing protein.
    
 
 0.452
ENSPNAP00000011785
Si:dkey-92f12.2.
    
 
 0.452
ankrd45
Ankyrin repeat domain 45.
    
 
 0.416
tubgcp3
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.408
ccdc47
Coiled-coil domain containing 47.
      
 0.405
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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