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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngfNerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (205 aa)    
Predicted Functional Partners:
ntrk1
Tyrosine-protein kinase receptor.
     
 0.952
LOC108412040
Nerve growth factor receptor b.
     
 0.928
LOC108411964
Neurotrophin receptor associated death domain.
     
 0.905
LOC108426697
Fibroblast growth factor receptor.
     
 0.886
LOC108424955
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
  
  
 
0.883
fgfr2
Fibroblast growth factor receptor.
     
 0.881
fgfr4
Fibroblast growth factor receptor 4.
     
 0.872
fgfr3
Fibroblast growth factor receptor.
     
 0.872
LOC108443857
Tyrosine-protein kinase receptor.
     
 0.847
ntrk2
Tyrosine-protein kinase receptor.
     
 0.847
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.