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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd2aMajor facilitator superfamily domain containing 2ab. (526 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.676
tk1
Thymidine kinase.
    
  0.663
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.656
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.564
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.564
LOC108443575
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.564
rrm1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.561
nt5e
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
    
 0.540
LOC108423915
NME/NM23 family member 8; Belongs to the NDK family.
    
  0.481
nme5
NME/NM23 family member 5; Belongs to the NDK family.
    
  0.457
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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