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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000003227Ras homolog gene family, member Gc. (120 aa)    
Predicted Functional Partners:
ENSPNAP00000007676
EH domain-containing protein.
    
 0.956
ENSPNAP00000007700
Uncharacterized protein.
    
 0.956
LOC108441044
Intersectin 2b.
    
 0.956
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.935
elmo2
Engulfment and cell motility 2.
    
 0.912
LOC108425788
Engulfment and cell motility 1 (ced-12 homolog, C. elegans).
    
 0.912
ARHGEF26
Rho guanine nucleotide exchange factor 26.
    
 0.856
LOC108412904
Uncharacterized protein.
   
 0.854
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
   
 0.838
LOC108432841
Rho GDP dissociation inhibitor (GDI) gamma.
   
 0.838
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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