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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108440336Activity-dependent neuroprotector homeobox a. (970 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
  
 0.654
LOC108432079
Bromodomain PHD finger transcription factor.
   
  
 0.508
BPTF
Bromodomain PHD finger transcription factor.
   
  
 0.508
LOC108425284
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 
 0.499
cbx5
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
    
 
 0.499
cbx1
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
 
 0.499
LOC108413138
Chromobox homolog 1a (HP1 beta homolog Drosophila).
    
 
 0.499
chd8
Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]
   
 
 0.475
ENSPNAP00000016738
Uncharacterized protein.
   
  
 0.468
aire
Autoimmune regulator.
   
 
 0.457
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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