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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbb2Amyloid beta (A4) precursor protein-binding, family B, member 2b. (903 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.808
LOC108426075
Amyloid beta (A4) precursor protein b.
    
 0.808
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.781
LOC108440469
Amyloid beta (A4) precursor-like protein 1.
    
 0.748
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.684
rad50
RAD50 homolog, double strand break repair protein.
   
 0.644
nbn
Nibrin.
    
  0.640
atm
Non-specific serine/threonine protein kinase.
    
 0.624
cd44
CD44 molecule (Indian blood group) b.
     
 0.615
LOC108415313
Mitogen-activated protein kinase.
    
 0.611
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.