close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108428167Microtubule associated monooxygenase, calponin and LIM domain containing 3b. (1641 aa)    
Predicted Functional Partners:
rab15
RAB15, member RAS oncogene family.
   
 
 0.509
RAB15
RAB15, member RAS oncogene family.
   
 
 0.509
LOC108425651
Uncharacterized protein.
   
 
 0.509
rab13
RAB13, member RAS oncogene family.
   
 
 0.509
RAB10
Uncharacterized protein.
   
 
 0.509
LOC108433638
Uncharacterized protein.
   
 
 0.509
LOC108441837
RAB8B, member RAS oncogene family.
   
 
 0.509
rab8a
RAB8A, member RAS oncogene family.
   
 
 0.509
garem2
GRB2 associated, regulator of MAPK1-like.
   
 
 0.504
garem1
GRB2 associated, regulator of MAPK1.
   
 
 0.504
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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