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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108412465N-acetylated alpha-linked acidic dipeptidase 2. (683 aa)    
Predicted Functional Partners:
rimkla
Ribosomal modification protein rimK-like family member A.
     
 0.830
nat8l
N-acetyltransferase 8-like.
     
 0.830
epor
Erythropoietin receptor.
    
 0.744
gak
Cyclin G associated kinase.
    
  0.687
LOC108411971
Aspartoacylase (aminocyclase) 3, tandem duplicate 2.
   
 
 0.640
LOC108440429
Uncharacterized protein.
   
 
 0.640
aspa
Aspartoacylase.
   
 
 0.640
LOC108425388
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
     
 0.629
dock4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
     
 0.612
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
     
 0.604
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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