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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108435393Potassium calcium-activated channel subfamily N member 2. (540 aa)    
Predicted Functional Partners:
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
  
  
0.819
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.800
LOC108437503
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.783
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.735
kcnj13
Potassium inwardly-rectifying channel, subfamily J, member 13.
   
 
 0.732
ENSPNAP00000011083
Si:ch211-38m6.7.
     
 0.720
etv1
Ets variant 1.
   
  
 0.702
LOC108443804
Calmodulin 2b, (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.613
LOC108422515
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.613
LOC108412802
Calmodulin.
    
 
 0.613
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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