close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim23Tripartite motif containing 23. (577 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.995
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.939
LOC108422653
Ubiquitin.
   
 0.939
ENSPNAP00000007676
EH domain-containing protein.
    
 0.904
ENSPNAP00000007700
Uncharacterized protein.
    
 0.904
LOC108441044
Intersectin 2b.
    
 0.904
ENSPNAP00000002599
Uncharacterized protein.
   
 
0.899
ARF6
ADP ribosylation factor 6.
   
 
0.899
ENSPNAP00000019083
ADP-ribosylation factor-like 15a.
   
 
0.896
LOC108433533
ADP-ribosylation factor-like 15b.
   
 
0.896
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.