STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aireAutoimmune regulator. (484 aa)    
Predicted Functional Partners:
LOC108438657
Retinoblastoma binding protein 4, like.
   
 0.858
rbbp4
Retinoblastoma binding protein 4.
   
 0.858
LOC108430512
Metastasis associated 1 family, member 3.
   
 0.820
mta2
Metastasis associated 1 family, member 2.
   
 0.820
mta1
Metastasis associated 1.
   
 0.820
LOC108438699
Methyl-CpG binding domain protein 2.
    
 0.814
LOC108427158
Methyl-CpG binding domain protein 3a.
    
 0.814
LOC108430109
Methyl-CpG binding domain protein 3a.
    
 0.814
hdac1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.813
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.805
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.