Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)    
Predicted Functional Partners:
rpl6
Ribosomal protein L6.
   
 0.998
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
  
 0.998
rpl18
Ribosomal protein L18.
   
 0.998
rpl8
Ribosomal protein L8.
   
 0.998
RPL32
Ribosomal protein L32.
   
 0.998
rpl21
Ribosomal protein L21.
  
 0.998
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.998
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.998
rpl34
Ribosomal protein L34.
   
 0.998
rpl31
Ribosomal protein L31.
  
 0.998
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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