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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpcdDeleted in primary ciliary dyskinesia homolog (mouse). (200 aa)    
Predicted Functional Partners:
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.909
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.906
wdr92
WD repeat domain 92.
    
 0.666
cunh7orf25
Zgc:55781.
      
 0.604
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
      
 0.593
rpap3
RNA polymerase II associated protein 3.
    
 
 0.497
spag6
Sperm associated antigen 6.
      
 0.495
frem1
Fras1 related extracellular matrix 1a.
   
 
  0.460
LOC108429520
Fras1 related extracellular matrix 1b.
   
 
  0.460
fras1
Fraser extracellular matrix complex subunit 1.
   
 
  0.454
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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