STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl20Kelch-like family member 20. (591 aa)    
Predicted Functional Partners:
sqstm1
Sequestosome 1.
    
 0.903
cul3
Cullin 3b; Belongs to the cullin family.
    
 0.894
LOC108428259
Cullin 3a; Belongs to the cullin family.
    
 0.894
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.853
bbs9
Bardet-Biedl syndrome 9.
    
 0.819
bbs1
Bardet-Biedl syndrome 1.
    
 0.819
bbs4
Bardet-Biedl syndrome 4.
    
 0.812
ttc8
Tetratricopeptide repeat domain 8.
    
 0.798
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.782
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.774
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (26%) [HD]