Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam183aFamily with sequence similarity 183 member A. (171 aa)    
Predicted Functional Partners:
cfap126
Cilia and flagella associated protein 126.
   
 
 0.985
cunh5orf49
Si:dkeyp-46h3.1.
   
 
 0.979
cfap77
Cilia and flagella associated protein 77.
    
 
 0.974
cunh11orf1
Expressed sequence EH456644.
    
 
 0.973
tekt2
Tektin 2 (testicular).
   
 
 0.944
iqcd
IQ motif containing D.
    
 
 0.943
ribc1
RIB43A domain with coiled-coils 1.
    
 
 0.926
LOC108441489
RIB43A domain with coiled-coils 2.
    
 
 0.926
C9orf135
Chromosome 9 open reading frame 135.
   
   0.921
cunh9orf116
Si:ch211-248e11.2.
   
   0.920
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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