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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108423993Abl-interactor 2a. (562 aa)    
Predicted Functional Partners:
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.960
LOC108427840
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.959
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.954
nckap1
NCK-associated protein 1.
    
 0.947
LOC108424652
NCK associated protein 1 like.
    
 0.947
wasf1
WASP family member 1.
    
 0.941
wasf2
WASP family member 2.
    
 0.904
abl2
Tyrosine-protein kinase.
    
 0.836
abl1
Tyrosine-protein kinase.
    
 0.836
LOC108429432
Si:ch73-362m14.4.
    
 0.807
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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