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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108430234Zinc finger RNA binding protein 2. (1003 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 
0.758
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
      
 0.501
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
      
 0.428
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.422
csk
Tyrosine-protein kinase.
 
   
  0.414
LOC108419600
Tyrosine-protein kinase.
 
   
  0.414
matk
Tyrosine-protein kinase.
 
   
  0.414
klhl6
BTB domain-containing protein.
   
  
 0.412
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.408
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.