Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108435350Pleckstrin homology domain containing, family A member 7a. (1322 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.730
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.689
lats1
Large tumor suppressor kinase 1.
    
 0.665
lats2
Large tumor suppressor kinase 2.
    
 0.665
LOC108425263
Protein tyrosine phosphatase, non-receptor type 23, b.
    
 0.589
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
    
 0.589
psmd4
Proteasome 26S subunit, non-ATPase 4a.
    
 
 0.584
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.579
birc6
Baculoviral IAP repeat containing 6.
    
 0.572
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.569
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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