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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108411964Neurotrophin receptor associated death domain. (380 aa)    
Predicted Functional Partners:
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.936
LOC108424955
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 0.928
bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
     
 0.914
ngf
Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.
     
 0.905
ngfr
Nerve growth factor receptor a (TNFR superfamily, member 16).
  
 
 
0.899
LOC108412040
Nerve growth factor receptor b.
  
  
 
0.889
ENSPNAP00000022501
NGF domain-containing protein; Belongs to the NGF-beta family.
    
 0.889
LOC108429931
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 
  0.879
LOC108437928
Ephrin-A3a; Belongs to the ephrin family.
     
 0.876
LOC108429914
Ephrin-A3b; Belongs to the ephrin family.
     
 0.876
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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