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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442528Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.866
asmtl
Acetylserotonin O-methyltransferase-like.
     
 0.840
ENSPNAP00000032041
AB hydrolase-1 domain-containing protein.
   
 0.747
LOC108428940
Cytochrome b5 reductase 4.
   
 0.683
wrn
WRN RecQ like helicase.
    
 0.661
LOC108432685
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
 0.651
LOC108440581
Cytochrome P450, family 19, subfamily A, polypeptide 1a; Belongs to the cytochrome P450 family.
  
  
 0.650
ENSPNAP00000021303
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  0.648
bard1
BRCA1 associated RING domain 1.
    
 0.647
LOC108412396
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
 0.640
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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