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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108411957Potassium voltage-gated channel, subfamily H (eag-related), member 1b. (964 aa)    
Predicted Functional Partners:
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.685
LOC108414610
Aldo_ket_red domain-containing protein.
    
 0.685
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.656
LOC108428302
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
    
 0.656
LOC108431628
Aldo_ket_red domain-containing protein.
    
 0.656
LOC108434650
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
    
 0.656
LOC108443804
Calmodulin 2b, (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.616
LOC108422515
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.616
LOC108412802
Calmodulin.
    
 
 0.616
LOC108415925
Uncharacterized protein; Belongs to the calmodulin family.
    
 
 0.616
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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