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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc3Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (315 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1 homolog.
    
 0.660
wrn
WRN RecQ like helicase.
    
 0.648
LOC108444442
ACD shelterin complex subunit and telomerase recruitment factor.
    
 0.572
ENSPNAP00000014111
Si:dkey-43k4.5; Belongs to the potassium channel family.
      
 0.528
golga7
Golgin A7.
    
 0.528
prep
Prolyl endopeptidase.
   
  
 0.512
ENSPNAP00000010970
Uncharacterized protein.
   
  
 0.512
LOC108443489
Golgin A7 family member B.
    
 0.498
LOC108436361
Golgin A7 family, member Ba.
    
 0.498
rad50
RAD50 homolog, double strand break repair protein.
    
 0.496
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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