Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108429169TNFR-Cys domain-containing protein. (290 aa)    
Predicted Functional Partners:
LOC108429050
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
     
 0.861
faslg
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
     
  0.860
LOC108432941
CD40 ligand; Belongs to the tumor necrosis factor family.
     
  0.860
LOC108411615
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
  0.859
tnf
Tumor necrosis factor a (TNF superfamily, member 2).
     
  0.709
ENSPNAP00000012490
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
  0.689
LOC108443670
Uncharacterized protein.
  
  
 
0.439
tmem38a
Transmembrane protein 38A.
      
 0.408
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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