Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000005099Leucine rich repeat transmembrane neuronal 4 like 2. (554 aa)    
Predicted Functional Partners:
LOC108412904
Uncharacterized protein.
    
  0.644
vstm4
V-set and transmembrane domain containing 4a.
    
 
 0.637
LOC108437315
V-set and transmembrane domain containing 4b.
    
 
 0.637
LOC108443207
Si:dkey-1h4.4.
  
     0.520
lrrc2
Uncharacterized protein.
  
     0.518
ENSPNAP00000017950
Uncharacterized protein.
  
     0.517
lrrc39
Leucine rich repeat containing 39.
  
     0.515
lrrc18
Leucine rich repeat containing 18a.
  
     0.515
LOC108432734
Leucine rich repeat containing 30a.
  
     0.514
LOC108437307
Leucine rich repeat containing 18b.
  
     0.514
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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