Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108441513Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1. (761 aa)    
Predicted Functional Partners:
rrp15
Ribosomal RNA processing 15 homolog.
      
 0.525
apmap
Adipocyte plasma membrane associated protein.
      
 0.523
fam171a1
Family with sequence similarity 171 member A1.
  
   
 0.507
tbx4
T-box transcription factor 4.
      
 0.506
tbx5
T-box transcription factor 5a.
      
 0.506
LOC108431823
Immunoglobulin superfamily, member 8.
      
 0.506
LOC108431404
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
   
 0.505
ENSPNAP00000022047
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.498
ENSPNAP00000026493
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.496
LOC108413004
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
   
 0.495
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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