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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde6hUncharacterized protein. (87 aa)    
Predicted Functional Partners:
LOC108414219
Guanylate kinase 1a.
   
 
  0.901
LOC108429017
Guanylate cyclase.
   
 
 0.896
LOC108432999
Guanylate cyclase.
   
 
 0.890
LOC108412585
Guanylate cyclase.
   
 
 0.888
npr2
Guanylate cyclase.
   
 
 0.882
gucy2c
Guanylate cyclase.
     
 0.881
LOC108436575
Guanylate cyclase.
   
 
 0.875
LOC108435512
Guanylate cyclase.
   
 
 0.860
ENSPNAP00000021264
Protein kinase domain-containing protein.
   
 
 0.860
LOC108442369
Guanylate kinase 1b.
   
 
  0.852
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.