close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108441440SH3-domain binding protein 5a (BTK-associated). (451 aa)    
Predicted Functional Partners:
rab11a
RAB11a, member RAS oncogene family.
    
 
 0.678
rab25
RAB11a, member RAS oncogene family, like.
    
 
 0.678
LOC108429533
RAB11B, member RAS oncogene family, a.
    
 
 0.678
LOC108427173
Uncharacterized protein.
    
 
 0.678
rabl2b
RAB, member of RAS oncogene family-like 2.
    
 
 0.586
LOC108433873
RAB25, member RAS oncogene family b.
    
 
 0.586
LOC108442629
RAB25, member RAS oncogene family a.
    
 
 0.586
dhps
Deoxyhypusine synthase.
      
 0.515
trappc10
Trafficking protein particle complex 10.
      
 0.504
usp10
Ubiquitin carboxyl-terminal hydrolase.
      
 0.463
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.