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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108428552Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
eri1
Exoribonuclease 1.
    
 
 0.593
henmt1
HEN methyltransferase 1.
      
 0.505
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.494
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 
 0.462
LOC108437780
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.450
eri2
Exonuclease domain-containing protein.
    
 
 0.434
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
  
 0.430
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.410
prmt5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
      
 0.400
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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