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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maffV-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F. (159 aa)    
Predicted Functional Partners:
LOC108425285
Nuclear factor, erythroid 2-like 3.
    
 0.692
LOC108435437
BTB and CNC homology 1, basic leucine zipper transcription factor 2a.
    
 0.692
bach2
BTB and CNC homology 1, basic leucine zipper transcription factor 2b.
    
 0.692
nfe2
Nuclear factor, erythroid 2.
    
 0.620
bach1
BTB and CNC homology 1, basic leucine zipper transcription factor 1 b.
    
 0.612
LOC108426972
BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.
    
 0.612
LOC108430871
Nuclear factor, erythroid 2-like 2b.
    
 0.610
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.610
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.596
LOC108413147
Nuclear factor, erythroid 2-like 1a.
    
 0.596
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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