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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppigPeptidylprolyl isomerase G (cyclophilin G). (740 aa)    
Predicted Functional Partners:
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.938
LOC108433158
Prostaglandin E synthase 3a (cytosolic).
   
 0.938
stip1
Stress-induced phosphoprotein 1.
  
 
 0.911
ptges3l
Si:ch211-131k2.3.
   
 0.905
LOC108425677
AHA1, activator of heat shock protein ATPase homolog 1b.
   
 
 0.904
LOC108411316
AHA1, activator of heat shock protein ATPase homolog 1a.
   
 
 0.904
tsc1
TSC complex subunit 1a.
  
 0.901
trap1
TNF receptor-associated protein 1.
  
 0.901
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.901
LOC108411468
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.901
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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