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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lyplal1Lysophospholipase like 1. (238 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.891
LOC108442417
Phospholipase A2.
     
 0.891
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.801
lpcat3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
   
 
 0.792
ENSPNAP00000001996
Si:dkey-177p2.18.
     
 0.787
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
    
 0.784
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
 0.739
abhd13
Abhydrolase domain containing 13.
     
 0.714
ZNHIT6
Zinc finger HIT-type containing 6.
    
   0.703
pla2g15
Phospholipase A2, group XV.
     
 0.683
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.