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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppfia4PTPRF interacting protein alpha 4. (1196 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.991
ENSPNAP00000009727
Uncharacterized protein.
    
 0.991
LOC108412427
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.850
cask
Calcium/calmodulin-dependent serine protein kinase a; Belongs to the MAGUK family.
    
 0.850
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
    
 0.736
LOC108426406
PPFIA binding protein 1a.
   
0.667
PPFIBP2
PPFIA binding protein 2.
   
 0.667
LOC108434021
PPFIA binding protein 2a.
   
0.667
ppfibp1
PPFIA binding protein 1b.
   
0.667
ENSPNAP00000031976
Uncharacterized protein.
   
0.667
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.