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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108412582Transmembrane protein 86B. (251 aa)    
Predicted Functional Partners:
lpcat4
Lysophosphatidylcholine acyltransferase 4.
     
 0.891
LOC108442489
Uncharacterized protein.
     
 0.885
enpp6
Ectonucleotide pyrophosphatase/phosphodiesterase 6.
     
 0.885
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.884
pla2g12b
Phospholipase A2, group XIIB.
   
 
  0.883
ENSPNAP00000001996
Si:dkey-177p2.18.
   
 
  0.882
enpp2
Ectonucleotide pyrophosphatase/phosphodiesterase 2.
   
 
 0.875
LOC108442488
Uncharacterized protein.
   
 
 0.776
enpp1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
   
 
 0.776
isoc2
Isochorismatase domain containing 2.
      
 0.666
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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