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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108441937Solute carrier family 22 member 2. (532 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
   
 
 0.898
suox
Sulfite oxidase.
     
 0.886
LOC108442478
Solute carrier family 44 member 1b; Belongs to the CTL (choline transporter-like) family.
     
 0.655
SLC44A1
Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family.
     
 0.655
ints9
Integrator complex subunit 9.
    
 0.640
ints1
Integrator complex subunit 1.
    
 0.638
ints11
Integrator complex subunit 11.
    
 0.638
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.635
LOC108437783
Solute carrier family 5 member 7a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.635
ints4
Integrator complex subunit 4.
    
 0.631
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.