STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108411940Neuraminidase 1. (380 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
    
 0.896
LOC108440164
Neuraminidase 3.
  
  
0.885
LOC108411932
Neuraminidase 1.
  
  
 
0.882
LOC108444013
Galactosylceramidase b.
     
 0.881
ENSPNAP00000011458
Uncharacterized protein.
     
 0.867
neu4
Sialidase 4.
  
  
0.867
glb1
Beta-galactosidase.
  
 0.851
LOC108415500
Galactosidase, beta 1-like.
  
 0.847
ercc3
Excision repair cross-complementation group 3.
  
    0.830
gba
Glucosylceramidase.
     
 0.817
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.