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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dusp28Dual specificity phosphatase 28. (165 aa)    
Predicted Functional Partners:
zc3h15
Zinc finger CCCH-type containing 15.
   
  
 0.621
WDR33
WD repeat domain 33.
   
 0.597
LOC108411906
Si:dkey-69o16.5.
      
 0.593
gak
Cyclin G associated kinase.
    
 0.562
sft2d3
Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.
      
 0.562
LOC108433470
C1q and TNF related 6a.
      
 0.554
vrk3
VRK serine/threonine kinase 3.
    
 0.550
mettl22
Methyltransferase like 22.
      
 0.546
ptprr
Protein tyrosine phosphatase receptor type R.
    
 0.528
LOC108440865
Si:ch1073-184j22.1.
      
 0.517
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.