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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108435919BTB (POZ) domain containing 2a. (592 aa)    
Predicted Functional Partners:
cops3
COP9 signalosome subunit 3.
    
 0.826
cul3
Cullin 3b; Belongs to the cullin family.
   
 0.822
LOC108428259
Cullin 3a; Belongs to the cullin family.
   
 0.822
cops2
COP9 signalosome subunit 2.
   
  0.819
cops5
COP9 signalosome subunit 5.
    
  0.804
cops8
COP9 signalosome subunit 8.
    
  0.775
ppp1r42
Protein phosphatase 1, regulatory subunit 42.
    
  0.733
COPS6
COP9 signalosome subunit 6.
    
  0.729
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.725
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.697
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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