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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cactinCactin. (879 aa)    
Predicted Functional Partners:
prkrip1
PRKR interacting protein 1.
    
 0.969
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.969
sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.942
fam32a
Family with sequence similarity 32 member A.
    
 0.942
slu7
SLU7 homolog, splicing factor.
    
 0.937
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.916
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.911
sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
 0.902
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.900
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.893
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.