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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAG1Stromal antigen 1a. (1159 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.971
LOC108427751
Structural maintenance of chromosomes protein.
   
 0.963
smc1a
Structural maintenance of chromosomes protein.
   
 0.960
LOC108426619
RAD21 cohesin complex component like 1.
   
 0.950
LOC108441496
Structural maintenance of chromosomes protein.
   
 0.948
LOC108412369
RAD21 cohesin complex component a.
   
 0.946
rad21
RAD21 cohesin complex component b.
   
 0.935
pds5b
PDS5 cohesin associated factor B.
   
 0.906
pds5a
PDS5 cohesin associated factor A.
   
 0.906
nipbl
Nipped-B protein.
   
 0.867
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.