Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dll1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (718 aa)    
Predicted Functional Partners:
notch1
Notch receptor 1b.
    
 0.949
LOC108429650
Notch receptor 3.
    
 0.944
LOC108439388
Notch receptor 2.
    
 0.944
mib1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.941
LOC108413122
Notch receptor 1a.
    
 0.938
dll4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
     
  0.815
LOC108413616
Hairy and enhancer of split related-7.
    
 
 0.721
ENSPNAP00000003421
Uncharacterized protein.
    
 0.720
ENSPNAP00000037632
LAM_G_DOMAIN domain-containing protein.
    
 0.720
wwp1
E3 ubiquitin-protein ligase.
    
 0.669
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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