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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxxc4CXXC finger 4. (287 aa)    
Predicted Functional Partners:
dvl2
Dishevelled segment polarity protein 2.
    
 0.901
LOC108430757
Dishevelled segment polarity protein 3a.
    
 0.900
dvl3
Dishevelled segment polarity protein 3b.
    
 0.892
LOC108412188
CXXC-type domain-containing protein.
  
  
0.867
LOC108411373
Dishevelled segment polarity protein 1b.
    
 0.852
dvl1
Dishevelled segment polarity protein 1a.
    
 0.852
cxxc5
CXXC finger protein 5a.
     
0.682
arid4b
Translocase of outer mitochondrial membrane 20.
   
 
 0.596
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 
 0.575
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 
 0.559
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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