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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr179Si:ch211-156l18.8. (1757 aa)    
Predicted Functional Partners:
LOC108412904
Uncharacterized protein.
    
  0.773
LOC108438669
Si:dkey-28e7.3.
      
 0.672
wdr90
WD repeat domain 90.
    
   0.568
nyx
Nyctalopin.
      
 0.487
LOC108436834
Uncharacterized protein.
    
 
 0.457
LOC108423915
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.429
LOC108425002
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
     
 0.425
gnb5
Guanine nucleotide binding protein (G protein), beta 5b.
    
 0.412
LOC108432683
Guanine nucleotide binding protein (G protein), beta 5a.
    
 0.412
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.