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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108413988Solute carrier family 17 member 7a. (582 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.740
ENSPNAP00000009727
Uncharacterized protein.
     
 0.740
ENSPNAP00000000584
Vesicle-associated membrane protein 2.
   
 
 0.681
LOC108415625
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.609
LOC108439829
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.609
syt1
Synaptotagmin Ia.
     
 0.606
LOC108427563
Synaptotagmin Ib.
     
 0.606
LOC108443129
Synaptotagmin IIa.
     
 0.592
SYT2
Synaptotagmin 2.
     
 0.592
LOC108443584
Vesicle-associated membrane protein 1.
   
 
 0.587
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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