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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd14bAbhydrolase domain containing 14B. (212 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
    
 0.900
palb2
PALB2_WD40 domain-containing protein.
   
 0.729
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.729
LOC108438648
MOB kinase activator 3C.
      
 0.673
tmem218
Transmembrane protein 218.
      
 0.593
acads
Acyl-CoA dehydrogenase short chain.
  
 0.571
acadsb
Acyl-CoA dehydrogenase short/branched chain.
  
 0.571
LOC108425866
Zgc:85777.
  
 0.564
ndufv3
NADH:ubiquinone oxidoreductase subunit V3.
      
 0.563
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.558
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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