Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108410784Thrombospondin, type I, domain containing 7Aa. (1610 aa)    
Predicted Functional Partners:
TMEM179
Transmembrane protein 179.
      
 0.568
b3glct
Beta 3-glucosyltransferase a.
     
 0.553
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.550
pofut2
Protein O-fucosyltransferase 2.
     
  0.513
thbs2
Thrombospondin 2a.
    
 0.491
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
 0.489
adamts14
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
   
 
 0.487
cfp
Complement factor properdin.
     
 0.482
adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12.
     
 0.468
ENSPNAP00000026505
Pep_M12B_propep domain-containing protein.
     
 0.468
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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