close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108437576Synaptophysin a. (301 aa)    
Predicted Functional Partners:
ENSPNAP00000000584
Vesicle-associated membrane protein 2.
   
 0.635
LOC108443584
Vesicle-associated membrane protein 1.
   
 0.616
LOC108429010
Zgc:92912.
   
 0.616
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.497
vamp3
Vesicle-associated membrane protein 3 (cellubrevin).
    
 0.457
m1ap
Meiosis 1 associated protein.
     
 0.454
nagk
N-acetylglucosamine kinase.
     
 0.454
npl
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase); Belongs to the DapA family.
   
 
  0.442
hoga1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
   
 
  0.442
LOC108442701
Beta-hexosaminidase.
   
 
  0.431
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.