STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc45Leucine rich repeat containing 45. (671 aa)    
Predicted Functional Partners:
pard6a
Par-6 family cell polarity regulator alpha.
     
 0.782
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
    0.755
LOC108411195
Non-specific serine/threonine protein kinase.
 
  
  0.699
pak2
Non-specific serine/threonine protein kinase.
 
  
  0.699
LOC108414409
Non-specific serine/threonine protein kinase.
 
  
  0.699
pak1
Non-specific serine/threonine protein kinase.
 
  
  0.699
LOC108427672
Ciliary rootlet coiled-coil, rootletin family member 2.
      
 0.670
ENSPNAP00000000938
Uncharacterized protein.
      
 0.666
wdr37
WD repeat domain 37.
      
 0.647
abl2
Tyrosine-protein kinase.
    
  0.643
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.