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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108441920Si:ch211-113g11.6; Belongs to the semaphorin family. (635 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
0.719
LOC108438495
Plexin C1.
    
 0.719
LOC108425528
Plexin A2.
    
0.719
LOC108444095
Sema domain-containing protein.
    
 0.719
LOC108425505
Plexin A1a.
    
0.719
ENSPNAP00000018567
Uncharacterized protein.
    
 0.719
plxna1
Plexin A1.
    
 0.719
plxna4
Plexin A4.
    
0.719
ENSPNAP00000028865
Sema domain-containing protein.
    
 0.719
ENSPNAP00000035200
Plexin_cytopl domain-containing protein.
    
 0.719
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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