close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108444288Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (361 aa)    
Predicted Functional Partners:
ckap4
Uncharacterized protein.
     
 0.637
ska1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.631
ENSPNAP00000010534
Spindle and kinetochore associated complex subunit 2.
   
 
 0.622
timeless
Timeless circadian clock.
   
 
 0.585
CLSPN
Claspin.
   
 
 0.584
LOC108414863
Uncharacterized protein.
    
 
 0.581
rpa3
Replication protein A3.
   
   0.560
rfwd3
Ring finger and WD repeat domain 3.
    
   0.555
zranb3
Zinc finger, RAN-binding domain containing 3.
    
 
 0.513
smarcal1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 
 0.513
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.